CITE CYTOSCAPE INSTALL
CITE CYTOSCAPE UPDATE
CITE CYTOSCAPE PATCH

Make sure the docs are updated with the list of releases in documentation/md/intro.md.

This ensures that npm lists the current version as the latest one.

CITE CYTOSCAPE PATCH

Do each backport patch release before the corresponding current release.

sniper : runs a biojs sniper server that hosts demos.

benchmark:single : run benchmarks only for the suite specified in benchmark/single.

ci:build : run tests and linting (on a built bundle).

test:build : run the Mocha unit tests (on a built bundle).

The library can be built on node>=6, but it can be tested on node>=0.10. This keeps local tests very quick to run on modern versions of node while ensuring we can test old versions of node as well. Otherwise, the unbundled, unbabelified, raw source is tested. If the TRAVIS or TEST_BUILD environment variables are defined, then mocha or gulp test will test build/.

CITE CYTOSCAPE UPDATE

dist : update the distribution js for npm etc.good for testing cytoscape in another project (with a 'cytoscape': 'file./path/to/cytoscape' reference in your project's package.json).watch:umd : automatically build prod umd bundle (no sourcemap, with babel).good for testing performance or for testing out of date browsers.watch:babel : automatically build lib for debugging (with sourcemap, with babel, a bit slower).served on or the first available port thereafter, with livereload on debug/index.html.good for general testing on debug/index.html.watch : automatically build lib for debugging (with sourcemap, no babel, very quick).docs : build the docs into documentation.build:umd : do the umd (cjs/amd/globals) build.build:min : do the unminified build with bundled dependencies (for simple html pages, good for novices).build:unmin : do the unminified build with bundled dependencies (for simple html pages, good for novices).build: do all builds of the library (unmin, min, umd).

CITE CYTOSCAPE INSTALL

Of course, npm install before using gulp or npm run. To cite Cytoscape.js in a paper, please cite the Oxford Bioinformatics issue:Ĭytoscape.js: a graph theory library for visualisation and analysisįranz M, Lopes CT, Huck G, Dong Y, Sumer O, Bader GDīioinformatics (2016) 32 (2): 309-311 first published online Septemdoi:10.1093/bioinformatics/btv557 (PDF) You can use the milestones to see what's currently planned for future releases. Roadmapįuture versions of Cytoscape.js are planned in the milestones of the Github issue tracker. You can find the documentation and downloads on the project website. Learn more about the features of Cytoscape.js by reading its documentation. You can get started with Cytoscape.js with one line: var cy = cytoscape()

This library was designed to make it as easy as possible for programmers and scientists to use graph theory in their apps, whether it's for server-side analysis in a Node.js app or for a rich user interface. Do you need to model and/or visualise relational data, like biological data or social networks? If so, Cytoscape.js is just what you need.Ĭytoscape.js contains a graph theory model and an optional renderer to display interactive graphs. Graph theory (network) library for visualisation and analysis : DescriptionĬytoscape.js is a fully featured graph theory library. This is an adaptation to Cytoscape.js with some custom algorithms embedded.

Cite cytoscape